delta-Aminovaleric acid (Compound)

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ID	1916
Name	delta-Aminovaleric acid
Synonyms	delta-Aminovalerate; 5-Aminovaleric acid; 5-Aminopentanoic acid
Structure	MOL SDF 3D-SDF PDB SMILES InChI View 3D Structure Structure for EE001916 (delta-Aminovaleric acid) 3D Structure for EE001916 (delta-Aminovaleric acid) 138 -OEChem-09032120403D 19 18 0 0 0 0 0 0 0999 V2000 3.2957 -0.7928 -0.0030 O 0 0 0 0 0 0 0 0 0 0 0 0 2.3505 1.2737 0.0329 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.0849 -0.2163 0.0491 N 0 0 0 0 0 0 0 0 0 0 0 0 -0.2736 0.2901 -0.0460 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6189 -0.4443 0.0083 C 0 0 0 0 0 0 0 0 0 0 0 0 0.9138 -0.6680 -0.0067 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8198 0.5025 -0.0430 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2372 0.0551 0.0084 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.2249 0.8972 -0.9588 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2119 0.9894 0.7975 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6622 -1.0392 0.9297 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6775 -1.1515 -0.8289 H 0 0 0 0 0 0 0 0 0 0 0 0 0.8602 -1.2883 0.8949 H 0 0 0 0 0 0 0 0 0 0 0 0 0.8903 -1.3194 -0.8873 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8020 1.0708 -0.9792 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.7585 1.2237 0.7797 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.8534 0.4527 0.0714 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1250 -0.7279 0.9296 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1505 -0.3116 0.0093 H 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 1 19 1 0 0 0 0 2 8 2 0 0 0 0 3 7 1 0 0 0 0 3 17 1 0 0 0 0 3 18 1 0 0 0 0 4 5 1 0 0 0 0 4 6 1 0 0 0 0 4 9 1 0 0 0 0 4 10 1 0 0 0 0 5 7 1 0 0 0 0 5 11 1 0 0 0 0 5 12 1 0 0 0 0 6 8 1 0 0 0 0 6 13 1 0 0 0 0 6 14 1 0 0 0 0 7 15 1 0 0 0 0 7 16 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 138 > <PUBCHEM_CONFORMER_RMSD> 0.6 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 29 16 19 25 7 27 26 3 14 8 30 24 4 5 23 12 18 11 21 15 28 20 10 13 6 9 22 17 2 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 9 1 -0.65 17 0.36 18 0.36 19 0.5 2 -0.57 3 -0.99 6 0.06 7 0.27 8 0.66 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 4 > <PUBCHEM_PHARMACOPHORE_FEATURES> 5 1 1 acceptor 1 2 acceptor 1 3 cation 1 3 donor 3 1 2 8 anion > <PUBCHEM_HEAVY_ATOM_COUNT> 8 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 0 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 1 > <PUBCHEM_CONFORMER_ID> 0000008A00000001 > <PUBCHEM_MMFF94_ENERGY> -1.445 > <PUBCHEM_FEATURE_SELFOVERLAP> 25.429 > <PUBCHEM_SHAPE_FINGERPRINT> 11062470 55 18342176665707465905 12932764 1 17385712608527247435 14325111 11 18410855477592913071 14390081 3 18410291419532830065 3248919 1 17132124545247678967 5460574 1 9439403532062000527 > <PUBCHEM_SHAPE_MULTIPOLES> 147.92 6.26 0.95 0.58 2.99 0.14 0 -0.16 -0.08 -0.48 0 0.03 0 0.03 > <PUBCHEM_SHAPE_SELFOVERLAP> 265.824 > <PUBCHEM_SHAPE_VOLUME> 95.2 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Description	Microbial metabolite identified in gut (table 1 from Donia 2015). Derives from arginine, proline and ornithine.
Classification	Compounds > Chemical entities > Organic compounds > Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Amino acids and derivatives > Delta amino acids and derivatives
CAS number	660-88-8
PubChem ID	138
ChEBI ID	15887
FooDB ID	FDB023151
HMDB ID	HMDB0003355

Chemical data

MolDBi data

IUPAC Name	5-aminopentanoic acid
Traditional IUPAC Name	5-aminovaleric acid
Formula	C5H11NO2
InChI	InChI=1S/C5H11NO2/c6-4-2-1-3-5(7)8/h1-4,6H2,(H,7,8)
InChI Key	JJMDCOVWQOJGCB-UHFFFAOYSA-N
Molecular weight	117.1463
Exact mass	117.078978601
SMILES	NCCCCC(O)=O

ClassyFire Taxonomy

Description	belongs to the class of organic compounds known as delta amino acids and derivatives. Delta amino acids and derivatives are compounds containing a carboxylic acid group and an amino group at the C5 carbon atom.
Kingdom	Organic compounds
Super Class	Organic acids and derivatives
Class	Carboxylic acids and derivatives
Sub Class	Amino acids, peptides, and analogues
Direct Parent	Delta amino acids and derivatives
Alternative Parents	Straight chain fatty acids Amino acids Monocarboxylic acids and derivatives Carboxylic acids Organopnictogen compounds Organic oxides Monoalkylamines Hydrocarbon derivatives Carbonyl compounds

Publications with delta-Aminovaleric acid

ID	Title	First author	Authors	Year	Journal	Volume	Issue	Pages	PubMed ID	DOI	Study design	No. of Biomarkers	No. of Intake values	No. of Concentration values	No. of Reproducibility values	No. of Correlation values	No. of Metabolomic associations	No. of Microbiota associations	No. of Cancer associations

Biomarker data

Measurements of delta-Aminovaleric acid in biospecimens

Concentration values

ID	Parent ID	Depth	Subject group	Population	Country	Cohort	Biomarker Time definition	Biospecimen	Analytical method	Biomarker	Biomarker detail	Measurement size	Detected (nb)	Detected (%)	Detected only?	Arithmethic mean	Arithmethic SD	Geometric mean	Geometric SD	Min	Min (detected)	Percentile_05	Percentile_10	Percentile_25	Median	Percentile_75	Percentile_90	Percentile_95	Max	Interquartile range	Mean 95% CI lower	Mean 95% CI upper	GMean 95% CI lower	GMean 95% CI upper	Unit	Converted arithmetic mean	Converted geometric mean	Converted median	Converted unit	Adjustment type	Adjusted on	Regressed on	Expressed as	Publication

Reproducibility values

ID	Excretion ID	Subject group	Population	Country	Cohort	Biomarker Time definition	Biospecimen	Analytical method	Biomarker	Biomarker detail	Arithmetic mean	Geometric mean	Median	Unit	Adjusted on	Reproducibility size	ICC	ICC 95% CI lower	ICC 95% CI upper	CV% WS	CV% BS	VAR WS	VAR BS	Publication

Associations of delta-Aminovaleric acid with exposures

Correlation values

ID	Intake ID	Excretion ID	Subject group	Population	Country	Cohort	Intake Time definition	Intake Assessment method	Intake	Intake detail	Supplement intakes included?	Intake Arithmetic mean	Intake Geometric mean	Intake Median	Intake Unit	Intake Adjusted on	Biomarker Time definition	Biospecimen	Analytical method	Biomarker	Biomarker detail	Biomarker Arithmetic mean	Biomarker Geometric mean	Biomarker Median	Biomarker Unit	Biomarker Adjusted on	Correlation size	Correlation type	Correlation value	Correlation 95% CI lower	Correlation 95% CI upper	Correlation p-value	Significant?	Measurement adjustment	Deattenuated?	Covariates	Publication

Metabolomic associations

ID	Intake ID	Excretion ID	Subject group	Population	Country	Cohort	No. of subjects	Intake Assessment method	Intake	Intervention dose	Biospecimen	Analytical method	Biomarker	Structural identification	Feature selection	Area under curve	Sensitivity	Specificity	PLS-DA VIP	Beta coefficient	Beta coefficient p-value	ANOVA p-value	Publication

Microbiota associations

ID	Biomarker	Experimental evidence	Organism	Biospecimen	Antibiotic	Bacterial source	Substrate	Publication

Associations of delta-Aminovaleric acid with cancer risk

Cancer associations

ID	Excretion ID	Subject group	Population	Country	Cohort	No. of subjects	No. of cases	No. of controls	Biospecimen	Analytical method	Biomarker	Biomarker detail	Cancer	Study design	Publication

Exposure data

Measurements of delta-Aminovaleric acid exposures in populations

Intake values

ID	Parent ID	Depth	Subject group	Population	Country	Cohort	Intake Time definition	Intake assessment tool	Intake food coverage	Intake time coverage	Intake Assessment method	Intake	Intake detail	Food description	Supplement intakes included?	Measurement size	Detected (nb)	Detected (%)	Detected only?	Arithmethic mean	Arithmethic SD	Geometric mean	Geometric SD	Min	Min (detected)	Percentile_05	Percentile_10	Percentile_25	Median	Percentile_75	Percentile_90	Percentile_95	Max	Interquartile range	Mean 95% CI lower	Mean 95% CI upper	GMean 95% CI lower	GMean 95% CI upper	Unit	Converted arithmetic mean	Converted geometric mean	Converted median	Converted unit	Adjustment type	Adjusted on	Regressed on	Expressed as	Publication

Associations of delta-Aminovaleric acid exposures with biomarkers

Correlation values

ID	Intake ID	Excretion ID	Subject group	Population	Country	Cohort	Intake Time definition	Intake Assessment method	Intake	Intake detail	Supplement intakes included?	Intake Arithmetic mean	Intake Geometric mean	Intake Median	Intake Unit	Intake Adjusted on	Biomarker Time definition	Biospecimen	Analytical method	Biomarker	Biomarker detail	Biomarker Arithmetic mean	Biomarker Geometric mean	Biomarker Median	Biomarker Unit	Biomarker Adjusted on	Correlation size	Correlation type	Correlation value	Correlation 95% CI lower	Correlation 95% CI upper	Correlation p-value	Significant?	Measurement adjustment	Deattenuated?	Covariates	Publication